BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009G06SP1|AL426093
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1775 1637 0.0
>3x_Contig1775
Length = 26320
Score = 1637 bits (816), Expect = 0.0
Identities = 837/854 (98%)
Strand = Plus / Plus
Query: 21 ataccactattagagagaatgatagttttagcagctagcattgaggcattgtgtgaagct 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5740 ataccactattagagagaatgatagttttagcagctagcattgaggcattgtgtgaagct 5799
Query: 81 ataacctggmtcaaatttcctaacgamatctgggtcggcagtmaattacgagaacgaacc 140
||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 5800 ataacctggatcaaatttcctaacgaaatctgggtcggcagtaaattacgagaacgaacc 5859
Query: 141 gtcgaaacgctgaaatcagtcagatctcaaaccgactccataatgaagaacaaaamaact 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5860 gtcgaaacgctgaaatcagtcagatctcaaaccgactccataatgaagaacaaaaaaact 5919
Query: 201 caagaattgggattgatgtggatacggtccctgagcgatagtctttcaaagatggaaaga 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5920 caagaattgggattgatgtggatacggtccctgagcgatagtctttcaaagatggaaaga 5979
Query: 261 macagggatcaaatatccccccctgaaccagaaacgaccaacggcagtcataatttctca 320
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5980 aacagggatcaaatatccccccctgaaccagaaacgaccaacggcagtaataatttctca 6039
Query: 321 tttttcggttctagcactggaatcactggcgaagactccmagactctccaamagcgagcm 380
||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 6040 tttttcggttctagcactggaatcactggcgaagactccaagactctccaaaagcgagca 6099
Query: 381 gacattwacactgtggaaammttccttgccaaggatctactaccagaaaagcagtacgaa 440
|||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6100 gacattaacactgtggaaaaattccttgccaaggatctactaccagaaaagcagtacgaa 6159
Query: 441 tgggtcaagacaagcttccctaacttgattcttgamacacaggccgagttcgataagata 500
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6160 tgggtcaagacaagcttccctaacttgattcttgaaacacaggccgagttcgataagata 6219
Query: 501 ataammgactatacattgacatggctgamaagacaaatgtctgtcgaatttgaccaaaca 560
|||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 6220 ataaaagactatacattgaaatggctgaaaagacaaatgtctgtcgaatttgaccaaaca 6279
Query: 561 agaaacatccaaactggagacaatgtcgatcagatctgtgatattcgaattctacgccat 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6280 agaaacatccaaactggagacaatgtcgatcagatctgtgatattcgaattctacgccat 6339
Query: 621 gaagattcttcaaaacgggcgttattagtaacacctactgaattgattctattaaatttg 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6340 gaagattcttcaaaacgggcgttattagtaacacctactgaattgattctattaaatttg 6399
Query: 681 cagacacagaaaattgatgtccgttcaccacttccattgccatcgcataaggtggcaatg 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6400 cagacacagaaaattgatgtccgttcaccacttccattgccatcgcataaggtggcaatg 6459
Query: 741 acccttacaagacacaacactgatccagccgctctaccactcaaaaaacagcagtacaag 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6460 acccttacaagacacaacactgatccagccgctctaccactcaaaaaacagcagtacaag 6519
Query: 801 aatccaagacttcaattggtccctatatctgctggacagccatctctatctactgcaccg 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6520 aatccaagacttcaattggtccctatatctgctggacagccatctctatctactgcaccg 6579
Query: 861 gtccaaaatatcac 874
||||||||||||||
Sbjct: 6580 gtccaaaatatcac 6593
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4980
Number of Sequences: 1807
Number of extensions: 4980
Number of successful extensions: 104
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)